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Galntl5 polypeptide N-acetylgalactosaminyltransferase like 5 [ Castor canadensis (American beaver) ]

Gene ID: 109685260, updated on 14-Mar-2024

Summary

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Gene symbol
Galntl5
Gene description
polypeptide N-acetylgalactosaminyltransferase like 5
See related
Ensembl:ENSCCNG00000022683
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870344.1 (149400..189751, complement)

NW_017870344.1Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 2C Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11 Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene Ras homolog, mTORC1 binding

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870344.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870344.1 Reference C.can genome v1.0

    Range
    149400..189751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020162000.1 → XP_020017589.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

    UniProtKB/TrEMBL
    A0A8B7UEL8, A0A8C0X6A4
    Related
    ENSCCNP00000023086.1, ENSCCNT00000029521.1
    Conserved Domains (1) summary
    cd02510
    Location:138 → 434
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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