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Syt12 synaptotagmin 12 [ Castor canadensis (American beaver) ]

Gene ID: 109676037, updated on 14-Mar-2024

Summary

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Gene symbol
Syt12
Gene description
synaptotagmin 12
See related
Ensembl:ENSCCNG00000003411
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017881966.1 (3660..18846)

NW_017881966.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017881966.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017881966.1 Reference C.can genome v1.0

    Range
    3660..18846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020152571.1 → XP_020008160.1  synaptotagmin-12 isoform X1

    UniProtKB/TrEMBL
    A0A8B7TSC5
    Related
    ENSCCNP00000003161.1, ENSCCNT00000004170.1
    Conserved Domains (2) summary
    cd08406
    Location:284 → 418
    C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
    cl14603
    Location:152 → 266
    C2; C2 domain

  2. XM_020152574.1 → XP_020008163.1  synaptotagmin-12 isoform X2

    UniProtKB/TrEMBL
    A0A8B7TMI0
    Conserved Domains (2) summary
    cd08406
    Location:169 → 303
    C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
    cl14603
    Location:37 → 151
    C2; C2 domain

  3. XM_020152572.1 → XP_020008161.1  synaptotagmin-12 isoform X2

    UniProtKB/TrEMBL
    A0A8B7TMI0
    Conserved Domains (2) summary
    cd08406
    Location:169 → 303
    C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
    cl14603
    Location:37 → 151
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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