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slu7 SLU7 homolog, splicing factor [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109640683, updated on 14-Mar-2024

Summary

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Gene symbol
slu7
Gene description
SLU7 homolog, splicing factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859641.1 (11110374..11115899, complement)

NW_017859641.1Genomic Context describing neighboring genes Neighboring gene cyclin J-like Neighboring gene C1q and TNF related 2 Neighboring gene histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like Neighboring gene uncharacterized LOC109646177

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859641.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pre-mRNA 3'-splice site binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor SLU7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859641.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    11110374..11115899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020104853.1 → XP_019960412.1  pre-mRNA-splicing factor SLU7

    Conserved Domains (1) summary
    pfam11708
    Location:154 → 410
    Slu7; Pre-mRNA splicing Prp18-interacting factor
Nucleotide Protein
Heading Accession and Version

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