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nfasca neurofascin homolog (chicken) a [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109640353, updated on 14-Mar-2024

Summary

Gene symbol
nfasca
Gene description
neurofascin homolog (chicken) a
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
nfasc
Orthologs
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Genomic context

See nfasca in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859727.1 (396285..500096)

NW_017859727.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 235-like Neighboring gene uncharacterized LOC109640352 Neighboring gene contactin 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_017859727.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859727.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    396285..500096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020104290.1XP_019959849.1  neurofascin isoform X1

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781373
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  2. XM_020104312.1XP_019959871.1  neurofascin isoform X20

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781387
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  3. XM_020104288.1XP_019959847.1  neurofascin isoform X1

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781373
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  4. XM_020104292.1XP_019959851.1  neurofascin isoform X2

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781367
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  5. XM_020104296.1XP_019959855.1  neurofascin isoform X5

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781361
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  6. XM_020104301.1XP_019959860.1  neurofascin isoform X10

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12371332
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  7. XM_020104295.1XP_019959854.1  neurofascin isoform X4

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12691364
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  8. XM_020104305.1XP_019959864.1  neurofascin isoform X13

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:11741269
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  9. XM_020104306.1XP_019959865.1  neurofascin isoform X14

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:11331228
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  10. XM_020104307.1XP_019959866.1  neurofascin isoform X15

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10831178
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  11. XM_020104308.1XP_019959867.1  neurofascin isoform X16

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10831172
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  12. XM_020104297.1XP_019959856.1  neurofascin isoform X6

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:630720
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12631358
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  13. XM_020104309.1XP_019959868.1  neurofascin isoform X17

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:630720
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10681157
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  14. XM_020104298.1XP_019959857.1  neurofascin isoform X7

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:637719
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:524610
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12621357
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:451516
    Ig; Immunoglobulin domain
    cl11960
    Location:353427
    Ig; Immunoglobulin domain
  15. XM_020104313.1XP_019959872.1  neurofascin isoform X21

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:637719
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:524610
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12621345
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:451516
    Ig; Immunoglobulin domain
    cl11960
    Location:353427
    Ig; Immunoglobulin domain
  16. XM_020104299.1XP_019959858.1  neurofascin isoform X8

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:614704
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:524610
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12471342
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:451516
    Ig; Immunoglobulin domain
    cl11960
    Location:353427
    Ig; Immunoglobulin domain
  17. XM_020104310.1XP_019959869.1  neurofascin isoform X18

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:614704
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:524610
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10521141
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:451516
    Ig; Immunoglobulin domain
    cl11960
    Location:353427
    Ig; Immunoglobulin domain
  18. XM_020104293.1XP_019959852.1  neurofascin isoform X3

    Conserved Domains (6) summary
    cd05875
    Location:54130
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:647729
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:534620
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12721367
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:461526
    Ig; Immunoglobulin domain
    cl11960
    Location:363437
    Ig; Immunoglobulin domain
  19. XM_020104300.1XP_019959859.1  neurofascin isoform X9

    Conserved Domains (6) summary
    cd05875
    Location:54130
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:608698
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:518604
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12411336
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:445510
    Ig; Immunoglobulin domain
    cl11960
    Location:347421
    Ig; Immunoglobulin domain
  20. XM_020104289.1XP_019959848.1  neurofascin isoform X1

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781373
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  21. XM_020104294.1XP_019959853.1  neurofascin isoform X3

    Conserved Domains (6) summary
    cd05875
    Location:54130
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:647729
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:534620
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12721367
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:461526
    Ig; Immunoglobulin domain
    cl11960
    Location:363437
    Ig; Immunoglobulin domain
  22. XM_020104291.1XP_019959850.1  neurofascin isoform X1

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781373
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  23. XM_020104302.1XP_019959861.1  neurofascin isoform X11

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781322
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  24. XM_020104304.1XP_019959863.1  neurofascin isoform X12

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:653735
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:12781310
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  25. XM_020104311.1XP_019959870.1  neurofascin isoform X19

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:630720
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:540626
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10681100
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:467532
    Ig; Immunoglobulin domain
    cl11960
    Location:369443
    Ig; Immunoglobulin domain
  26. XM_020104314.1XP_019959873.1  neurofascin isoform X22

    Conserved Domains (6) summary
    cd05875
    Location:60136
    Ig_hNeurofascin_like; Immunoglobulin (Ig)-like domain of human neurofascin (NF)
    cd00063
    Location:614704
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:524610
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:10521084
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:451516
    Ig; Immunoglobulin domain
    cl11960
    Location:353427
    Ig; Immunoglobulin domain

RNA

  1. XR_002203493.1 RNA Sequence