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LOC109639450 KH-type splicing regulatory protein [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109639450, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109639450
Gene description
KH-type splicing regulatory protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
khsrp
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859695.1 (602682..610008)

NW_017859695.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene ATPase family AAA domain containing 5a Neighboring gene MHC class II regulatory factor RFX1-like Neighboring gene relaxin-3-like Neighboring gene interleukin 12 receptor, beta 2a, like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859695.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
far upstream element-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859695.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    602682..610008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020102927.1 → XP_019958486.1  far upstream element-binding protein 2 isoform X1

    Conserved Domains (2) summary
    pfam00013
    Location:117 → 181
    KH_1; KH domain
    pfam09005
    Location:624 → 638
    DUF1897; Domain of unknown function (DUF1897)

  2. XM_020102928.1 → XP_019958487.1  far upstream element-binding protein 2 isoform X2

    Conserved Domains (2) summary
    pfam00013
    Location:117 → 181
    KH_1; KH domain
    pfam09005
    Location:619 → 633
    DUF1897; Domain of unknown function (DUF1897)

RNA

  1. XR_002203393.1 RNA Sequence

  2. XR_002203394.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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