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srrm4 serine/arginine repetitive matrix 4 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109636938, updated on 14-Mar-2024

Summary

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Gene symbol
srrm4
Gene description
serine/arginine repetitive matrix 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859673.1 (4926111..4973891)

NW_017859673.1Genomic Context describing neighboring genes Neighboring gene TAO kinase 3a Neighboring gene SDS3 homolog, SIN3A corepressor complex component Neighboring gene heat shock protein beta-1-like Neighboring gene heat shock protein b8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859673.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine repetitive matrix protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859673.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    4926111..4973891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020098982.1 → XP_019954541.1  serine/arginine repetitive matrix protein 4 isoform X1

    Conserved Domains (1) summary
    pfam15230
    Location:474 → 540
    SRRM_C; Serine/arginine repetitive matrix protein C-terminus

  2. XM_020098983.1 → XP_019954542.1  serine/arginine repetitive matrix protein 4 isoform X2

    Conserved Domains (1) summary
    pfam15230
    Location:445 → 511
    SRRM_C; Serine/arginine repetitive matrix protein C-terminus
Nucleotide Protein
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