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rnf114 ring finger protein 114 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109634991, updated on 14-Mar-2024

Summary

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Gene symbol
rnf114
Gene description
ring finger protein 114
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859666.1 (2861647..2867381, complement)

NW_017859666.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109635110 Neighboring gene MAF bZIP transcription factor Ba Neighboring gene opsin-5-like Neighboring gene solute carrier family 9 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859666.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF114

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859666.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    2861647..2867381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020095864.1 → XP_019951423.1  E3 ubiquitin-protein ligase RNF114

    Conserved Domains (2) summary
    pfam05605
    Location:139 → 198
    zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    cl17238
    Location:26 → 67
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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