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abcb4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109633038, updated on 14-Mar-2024

Summary

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Gene symbol
abcb4
Gene description
ATP-binding cassette, sub-family B (MDR/TAP), member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
abcb1
Orthologs
zebrafish all
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Genomic context

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See abcb4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859661.1 (3396450..3405568, complement)

NW_017859661.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 7 Neighboring gene phosphatidylcholine translocator ABCB4-like Neighboring gene carnitine O-octanoyltransferase Neighboring gene RUN domain containing 3b Neighboring gene solute carrier family 25 member 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859661.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multidrug resistance protein 1
Names
ATP binding cassette subfamily B member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859661.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    3396450..3405568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020092627.1 → XP_019948186.1  multidrug resistance protein 1

    Conserved Domains (3) summary
    cd03249
    Location:399 → 636
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    COG1132
    Location:121 → 637
    MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
    pfam00664
    Location:726 → 985
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
Heading Accession and Version

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