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nck1b NCK adaptor protein 1b [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109629668, updated on 14-Mar-2024

Summary

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Gene symbol
nck1b
Gene description
NCK adaptor protein 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
nck1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859653.1 (10117091..10144891)

NW_017859653.1Genomic Context describing neighboring genes Neighboring gene Golgi reassembly-stacking protein 2-like Neighboring gene solute carrier family 35 member G2b Neighboring gene glycogenin-1-like Neighboring gene 3-hydroxybutyrate dehydrogenase, type 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859653.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of PERK-mediated unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation in response to endoplasmic reticulum stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic protein NCK1
Names
NCK adaptor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859653.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    10117091..10144891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020087444.1 → XP_019943003.1  cytoplasmic protein NCK1 isoform X1

    Conserved Domains (4) summary
    cd11900
    Location:3 → 61
    SH3_Nck1_1; First Src Homology 3 domain of Nck1 adaptor protein
    cd11901
    Location:110 → 164
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:204 → 260
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein
    cl15255
    Location:294 → 390
    SH2; Src homology 2 (SH2) domain

  2. XM_020087445.1 → XP_019943004.1  cytoplasmic protein NCK1 isoform X2

    Conserved Domains (3) summary
    cd11901
    Location:46 → 100
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:140 → 196
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein
    cl15255
    Location:230 → 326
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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