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prps1b phosphoribosyl pyrophosphate synthetase 1B [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109627776, updated on 14-Mar-2024

Summary

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Gene symbol
prps1b
Gene description
phosphoribosyl pyrophosphate synthetase 1B
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
prps1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859641.1 (11823632..11828463)

NW_017859641.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109624817 Neighboring gene FERM and PDZ domain containing 3 Neighboring gene uncharacterized LOC109624363 Neighboring gene solute carrier family 25 member 53

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859641.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribose-phosphate pyrophosphokinase 1
Names
phosphoribosyl pyrophosphate synthetase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859641.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    11823632..11828463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020084552.1 → XP_019940111.1  ribose-phosphate pyrophosphokinase 1 isoform X1

    Conserved Domains (1) summary
    COG0462
    Location:1 → 315
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]

  2. XM_020084560.1 → XP_019940119.1  ribose-phosphate pyrophosphokinase 1 isoform X2

    Conserved Domains (1) summary
    COG0462
    Location:1 → 313
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]

  3. XM_020084569.1 → XP_019940128.1  ribose-phosphate pyrophosphokinase 1 isoform X3

    Conserved Domains (1) summary
    cl26081
    Location:2 → 212
    Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
Nucleotide Protein
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