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dcps decapping enzyme, scavenger [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109627365, updated on 14-Mar-2024

Summary

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Gene symbol
dcps
Gene description
decapping enzyme, scavenger
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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See dcps in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859641.1 (17144756..17147324, complement)

NW_017859641.1Genomic Context describing neighboring genes Neighboring gene LON peptidase N-terminal domain and RING finger protein 3-like Neighboring gene uncharacterized LOC109627179 Neighboring gene iduronate 2-sulfatase Neighboring gene AF4/FMR2 family, member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859641.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
m7GpppX diphosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859641.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    17144756..17147324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020083863.1 → XP_019939422.1  m7GpppX diphosphatase

    Conserved Domains (1) summary
    cl27009
    Location:32 → 302
    DcpS; Scavenger mRNA decapping enzyme (DcpS) N-terminal
Nucleotide Protein
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