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frmd4a FERM domain containing 4A [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109624513, updated on 14-Mar-2024

Summary

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Gene symbol
frmd4a
Gene description
FERM domain containing 4A
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859644.1 (4456513..4541116)

NW_017859644.1Genomic Context describing neighboring genes Neighboring gene receptor-interacting serine/threonine-protein kinase 3-like Neighboring gene IMP (inosine 5'-monophosphate) dehydrogenase 1a Neighboring gene uncharacterized LOC109624244 Neighboring gene B-cadherin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859644.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in establishment of epithelial cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FERM domain-containing protein 4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859644.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    4456513..4541116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020079243.1 → XP_019934802.1  FERM domain-containing protein 4A isoform X6

    Conserved Domains (3) summary
    smart00295
    Location:17 → 217
    B41; Band 4.1 homologues
    cd13191
    Location:213 → 324
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:380 → 486
    DUF3338; Domain of unknown function (DUF3338)

  2. XM_020079241.1 → XP_019934800.1  FERM domain-containing protein 4A isoform X4

    Conserved Domains (3) summary
    smart00295
    Location:37 → 237
    B41; Band 4.1 homologues
    cd13191
    Location:233 → 343
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:399 → 505
    DUF3338; Domain of unknown function (DUF3338)

  3. XM_020079242.1 → XP_019934801.1  FERM domain-containing protein 4A isoform X5

    Conserved Domains (3) summary
    smart00295
    Location:37 → 237
    B41; Band 4.1 homologues
    cd13191
    Location:233 → 344
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:400 → 506
    DUF3338; Domain of unknown function (DUF3338)

  4. XM_020079240.1 → XP_019934799.1  FERM domain-containing protein 4A isoform X3

    Conserved Domains (3) summary
    smart00295
    Location:37 → 237
    B41; Band 4.1 homologues
    cd13191
    Location:233 → 344
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:400 → 506
    DUF3338; Domain of unknown function (DUF3338)

  5. XM_020079245.1 → XP_019934804.1  FERM domain-containing protein 4A isoform X8

    Conserved Domains (4) summary
    cd13191
    Location:202 → 313
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam09379
    Location:40 → 96
    FERM_N; FERM N-terminal domain
    pfam00373
    Location:94 → 206
    FERM_M; FERM central domain
    pfam11819
    Location:369 → 475
    DUF3338; Domain of unknown function (DUF3338)

  6. XM_020079239.1 → XP_019934798.1  FERM domain-containing protein 4A isoform X2

    Conserved Domains (3) summary
    smart00295
    Location:62 → 262
    B41; Band 4.1 homologues
    cd13191
    Location:258 → 368
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:424 → 530
    DUF3338; Domain of unknown function (DUF3338)

  7. XM_020079238.1 → XP_019934797.1  FERM domain-containing protein 4A isoform X1

    Conserved Domains (3) summary
    smart00295
    Location:62 → 262
    B41; Band 4.1 homologues
    cd13191
    Location:258 → 368
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:424 → 530
    DUF3338; Domain of unknown function (DUF3338)

  8. XM_020079244.1 → XP_019934803.1  FERM domain-containing protein 4A isoform X7

    Conserved Domains (3) summary
    smart00295
    Location:6 → 206
    B41; Band 4.1 homologues
    cd13191
    Location:202 → 313
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:369 → 475
    DUF3338; Domain of unknown function (DUF3338)

  9. XM_020079246.1 → XP_019934805.1  FERM domain-containing protein 4A isoform X9

    Conserved Domains (3) summary
    smart00295
    Location:2 → 181
    B41; Band 4.1 homologues
    cd13191
    Location:177 → 288
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:344 → 450
    DUF3338; Domain of unknown function (DUF3338)

  10. XM_020079247.1 → XP_019934806.1  FERM domain-containing protein 4A isoform X10

    Conserved Domains (2) summary
    pfam11819
    Location:74 → 180
    DUF3338; Domain of unknown function (DUF3338)
    cl17171
    Location:1 → 18
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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