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DCP1A decapping mRNA 1A [ Bos indicus (zebu cattle) ]

Gene ID: 109576220, updated on 14-Mar-2024

Summary

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Gene symbol
DCP1A
Gene description
decapping mRNA 1A
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 22 NC_032671.1 (48733910..48778197)

Chromosome 22 - NC_032671.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene microtubule-associated proteins 1A/1B light chain 3B pseudogene Neighboring gene PRELI domain containing protein 3B pseudogene Neighboring gene transketolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032671.1 Chromosome 22 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA-decapping enzyme 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032671.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    48733910..48778197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019984751.1 → XP_019840310.1  mRNA-decapping enzyme 1A

    UniProtKB/TrEMBL
    A0A6P5DT91
    Conserved Domains (3) summary
    cd09804
    Location:6 → 126
    Dcp1; mRNA decapping enzyme 1 (Dcp1)
    pfam16741
    Location:536 → 578
    mRNA_decap_C; mRNA-decapping enzyme C-terminus
    cl26464
    Location:277 → 525
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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