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XAF1 XIAP associated factor 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109574396, updated on 14-Mar-2024

Summary

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Gene symbol
XAF1
Gene description
XIAP associated factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 19 NC_032668.1 (25248739..25262281, complement)

Chromosome 19 - NC_032668.1Genomic Context describing neighboring genes Neighboring gene proteasome maturation protein pseudogene Neighboring gene F-box protein 39 Neighboring gene selenoprotein W-like Neighboring gene solute carrier family 13 member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032668.1 Chromosome 19 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XIAP-associated factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032668.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    25248739..25262281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019982405.1 → XP_019837964.1  XIAP-associated factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5DL05
    Conserved Domains (1) summary
    cl27293
    Location:7 → 127
    UFD1; Ubiquitin fusion degradation protein UFD1

  2. XM_019982409.1 → XP_019837968.1  XIAP-associated factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P5DIE0
    Conserved Domains (1) summary
    cl27293
    Location:7 → 127
    UFD1; Ubiquitin fusion degradation protein UFD1

  3. XM_019982410.1 → XP_019837969.1  XIAP-associated factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A6P5DJP2
    Conserved Domains (1) summary
    cl27293
    Location:8 → 67
    UFD1; Ubiquitin fusion degradation protein UFD1

  4. XM_019982408.1 → XP_019837967.1  XIAP-associated factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P5DLJ5
    Conserved Domains (1) summary
    cl27293
    Location:4 → 99
    UFD1; Ubiquitin fusion degradation protein UFD1

  5. XM_019982407.1 → XP_019837966.1  XIAP-associated factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5DIL8
    Conserved Domains (1) summary
    cl27293
    Location:6 → 121
    UFD1; Ubiquitin fusion degradation protein UFD1

  6. XM_019982406.1 → XP_019837965.1  XIAP-associated factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5DL05
    Conserved Domains (1) summary
    cl27293
    Location:7 → 127
    UFD1; Ubiquitin fusion degradation protein UFD1
Nucleotide Protein
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