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EXOSC5 exosome component 5 [ Bos indicus (zebu cattle) ]

Gene ID: 109572634, updated on 11-Apr-2024

Summary

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Gene symbol
EXOSC5
Gene description
exosome component 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 18 NC_032667.1 (50217649..50228067, complement)

Chromosome 18 - NC_032667.1Genomic Context describing neighboring genes Neighboring gene B9 domain containing 2 Neighboring gene transmembrane protein 91 Neighboring gene branched chain keto acid dehydrogenase E1 subunit alpha Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032667.1 Chromosome 18 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex component RRP46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032667.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    50217649..50228067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019979587.1 → XP_019835146.1  exosome complex component RRP46

    UniProtKB/TrEMBL
    A0A6P5DA82
    Conserved Domains (1) summary
    cd11372
    Location:28 → 225
    RNase_PH_RRP46; RRP46 subunit of eukaryotic exosome
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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