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CUBN cubilin [ Bos indicus (zebu cattle) ]

Gene ID: 109567986, updated on 14-Mar-2024

Summary

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Gene symbol
CUBN
Gene description
cubilin
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
67
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 13 NC_032662.1 (31097636..31356816, complement)

Chromosome 13 - NC_032662.1Genomic Context describing neighboring genes Neighboring gene phosphotriesterase related Neighboring gene complement C1q like 3 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene Ras suppressor protein 1 Neighboring gene tRNA aspartic acid methyltransferase 1 Neighboring gene vimentin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032662.1 Chromosome 13 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cubilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032662.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    31097636..31356816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019973121.1 → XP_019828680.1  cubilin

    UniProtKB/TrEMBL
    A0A6P5CSM8
    Conserved Domains (4) summary
    smart00179
    Location:260 → 301
    EGF_CA; Calcium-binding EGF-like domain
    cd00041
    Location:1617 → 1730
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:167 → 207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam12947
    Location:350 → 384
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

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