U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC8A1 solute carrier family 8 member A1 [ Bos indicus (zebu cattle) ]

Gene ID: 109566012, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SLC8A1
Gene description
solute carrier family 8 member A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC8A1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 11 NC_032660.1 (23623781..24071104, complement)

Chromosome 11 - NC_032660.1Genomic Context describing neighboring genes Neighboring gene THUMP domain containing 2 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene 60S ribosomal protein L36 pseudogene Neighboring gene protein kinase domain containing, cytoplasmic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_032660.1 Chromosome 11 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium/calcium exchanger 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032660.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    23623781..24071104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019970050.1 → XP_019825609.1  sodium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5CJE3
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 934
    caca; sodium/calcium exchanger 1

  2. XM_019970051.1 → XP_019825610.1  sodium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5CJE3
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 934
    caca; sodium/calcium exchanger 1

  3. XM_019970049.1 → XP_019825608.1  sodium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5CJE3
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 934
    caca; sodium/calcium exchanger 1

  4. XM_019970048.1 → XP_019825607.1  sodium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5CJE3
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 934
    caca; sodium/calcium exchanger 1

  5. XM_019970052.1 → XP_019825611.1  sodium/calcium exchanger 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5CHX0
    Conserved Domains (1) summary
    TIGR00845
    Location:12 → 302
    caca; sodium/calcium exchanger 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.