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HOXA5 homeobox A5 [ Bos indicus (zebu cattle) ]

Gene ID: 109557500, updated on 14-Mar-2024

Summary

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Gene symbol
HOXA5
Gene description
homeobox A5
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See HOXA5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 4 NC_032653.1 (71510593..71516091)

Chromosome 4 - NC_032653.1Genomic Context describing neighboring genes Neighboring gene homeobox A9 Neighboring gene homeobox A7 Neighboring gene homeobox A6 Neighboring gene homeobox A3 Neighboring gene homeobox A4 Neighboring gene homeobox A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032653.1 Chromosome 4 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032653.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    71510593..71516091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019958851.1 → XP_019814410.1  homeobox protein Hox-A5

    UniProtKB/TrEMBL
    A0A6P5BQU4
    Conserved Domains (1) summary
    pfam00046
    Location:310 → 363
    Homeobox; Homeobox domain

RNA

  1. XR_002180546.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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