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CASQ2 calsequestrin 2 [ Bos indicus (zebu cattle) ]

Gene ID: 109555880, updated on 14-Mar-2024

Summary

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Gene symbol
CASQ2
Gene description
calsequestrin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 3 NC_032652.1 (30024043..30094547)

Chromosome 3 - NC_032652.1Genomic Context describing neighboring genes Neighboring gene galectin-related protein pseudogene Neighboring gene nescient helix-loop-helix 2 Neighboring gene VANGL planar cell polarity protein 1 Neighboring gene 40S ribosomal protein SA pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032652.1 Chromosome 3 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in sarcoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calsequestrin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032652.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    30024043..30094547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019956744.1 → XP_019812303.1  calsequestrin-2

    UniProtKB/TrEMBL
    A0A6P5B0Y3
    Conserved Domains (1) summary
    pfam01216
    Location:48 → 397
    Calsequestrin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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