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CATSPER1 cation channel sperm associated 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109554130, updated on 14-Mar-2024

Summary

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Gene symbol
CATSPER1
Gene description
cation channel sperm associated 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 29
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 29 NC_032678.1 (46114269..46121923, complement)

Chromosome 29 - NC_032678.1Genomic Context describing neighboring genes Neighboring gene BAF nuclear assembly factor 1 Neighboring gene cystatin E/M Neighboring gene galactose-3-O-sulfotransferase 3 Neighboring gene splicing factor 3b subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032678.1 Chromosome 29 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cilium beat frequency involved in ciliary motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation channel sperm-associated protein 1
Names
cation channel sperm associated 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032678.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    46114269..46121923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019954438.1 → XP_019809997.1  cation channel sperm-associated protein 1

    UniProtKB/TrEMBL
    A0A6P5BBL2
    Conserved Domains (2) summary
    pfam14988
    Location:389 → 462
    DUF4515; Domain of unknown function (DUF4515)
    pfam00520
    Location:156 → 388
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

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