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ddr2a discoidin domain receptor tyrosine kinase 2a [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109532087, updated on 11-Apr-2024

Summary

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Gene symbol
ddr2a
Gene description
discoidin domain receptor tyrosine kinase 2a
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
ddr2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017806175.1 (2781231..2813233, complement)

NW_017806175.1Genomic Context describing neighboring genes Neighboring gene plasminogen activator inhibitor 1 RNA-binding protein-like Neighboring gene 3-keto-steroid reductase-like Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1 Neighboring gene UBX domain protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017806175.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase collagen receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
discoidin domain-containing receptor 2
Names
discoidin domain receptor tyrosine kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017806175.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    2781231..2813233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019896731.1 → XP_019752290.1  discoidin domain-containing receptor 2

    UniProtKB/TrEMBL
    A0A3Q2YUM5
    Conserved Domains (2) summary
    cd00057
    Location:78 → 230
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl21453
    Location:600 → 896
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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