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ap5z1 adaptor related protein complex 5 subunit zeta 1 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109520251, updated on 14-Mar-2024

Summary

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Gene symbol
ap5z1
Gene description
adaptor related protein complex 5 subunit zeta 1
See related
Ensembl:ENSHCOG00000007072
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805503.1 (159196..166308, complement)

NW_017805503.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain, phosphoinositide interacting 2 Neighboring gene monocyte to macrophage differentiation-associated 2a Neighboring gene caspase recruitment domain family, member 11 Neighboring gene carbohydrate (chondroitin 4) sulfotransferase 12a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805503.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of AP-5 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-5 complex subunit zeta-1
Names
adaptor related protein complex 5 zeta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805503.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    159196..166308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019877362.1 → XP_019732921.1  AP-5 complex subunit zeta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3DUC9
    Conserved Domains (1) summary
    pfam14764
    Location:339 → 456
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_019877363.1 → XP_019732922.1  AP-5 complex subunit zeta-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3DUC9
    Related
    ENSHCOP00000020755.1, ENSHCOT00000005444.1
    Conserved Domains (1) summary
    pfam14764
    Location:323 → 440
    SPG48; AP-5 complex subunit, vesicle trafficking
Nucleotide Protein
Heading Accession and Version

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