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esyt2b extended synaptotagmin-like protein 2b [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109519499, updated on 14-Mar-2024

Summary

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Gene symbol
esyt2b
Gene description
extended synaptotagmin-like protein 2b
See related
Ensembl:ENSHCOG00000012161
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
esyt2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805483.1 (67871..95777)

NW_017805483.1Genomic Context describing neighboring genes Neighboring gene MAM and LDL receptor class A domain containing 1 Neighboring gene dynein 2 intermediate chain 1 Neighboring gene non-SMC condensin II complex, subunit G2 Neighboring gene protein tyrosine phosphatase receptor type N2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805483.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum-plasma membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extended synaptotagmin-2
Names
extended synaptotagmin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805483.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    67871..95777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019876069.1 → XP_019731628.1  extended synaptotagmin-2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XX33
    Conserved Domains (4) summary
    cd04030
    Location:773 → 898
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:486 → 626
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:334 → 454
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    cl27773
    Location:140 → 319
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

  2. XM_019876070.1 → XP_019731629.1  extended synaptotagmin-2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2XX33
    Conserved Domains (4) summary
    cd04030
    Location:758 → 883
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:486 → 611
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:334 → 454
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    cl27773
    Location:140 → 319
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

  3. XM_019876071.1 → XP_019731630.1  extended synaptotagmin-2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2XX33
    Related
    ENSHCOP00000009618.1, ENSHCOT00000015786.1
    Conserved Domains (4) summary
    cd04030
    Location:739 → 864
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:486 → 592
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:334 → 454
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    cl27773
    Location:140 → 319
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

  4. XM_019876072.1 → XP_019731631.1  extended synaptotagmin-2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2XX33
    Conserved Domains (4) summary
    cd04030
    Location:620 → 745
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:333 → 473
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:181 → 301
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    cl27773
    Location:1 → 166
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
Nucleotide Protein
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