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eloc elongin C [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109517014, updated on 9-Nov-2023

Summary

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Gene symbol
eloc
Gene description
elongin C
See related
Ensembl:ENSHCOG00000004749
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805352.1 (203735..206530)

NW_017805352.1Genomic Context describing neighboring genes Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene junctophilin 1a Neighboring gene uncharacterized LOC109517008 Neighboring gene ubiquitin conjugating enzyme E2 Wb Neighboring gene staufen double-stranded RNA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805352.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor B polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805352.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    203735..206530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019871891.1 → XP_019727450.1  transcription elongation factor B polypeptide 1

    UniProtKB/TrEMBL
    A0A3Q2XGG6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  2. XM_019871892.1 → XP_019727451.1  transcription elongation factor B polypeptide 1

    UniProtKB/TrEMBL
    A0A3Q2XGG6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  3. XM_019871890.1 → XP_019727449.1  transcription elongation factor B polypeptide 1

    UniProtKB/TrEMBL
    A0A3Q2XGG6
    Related
    ENSHCOP00000003433.1, ENSHCOT00000008745.1
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
Nucleotide Protein
Heading Accession and Version

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