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grin2ba glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate a [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109516452, updated on 16-Mar-2024

Summary

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Gene symbol
grin2ba
Gene description
glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate a
See related
Ensembl:ENSHCOG00000005770
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
grin2b
Orthologs
zebrafish all
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Genomic context

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See grin2ba in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805280.1 (325263..400127)

NW_017805280.1Genomic Context describing neighboring genes Neighboring gene heme binding protein 1 Neighboring gene formation of mitochondrial complex V assembly factor 1 homolog Neighboring gene transcription factor 20 Neighboring gene germ cell-specific gene 1 protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805280.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in excitatory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, NMDA 2B
Names
glutamate ionotropic receptor NMDA type subunit 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805280.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    325263..400127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019871012.1 → XP_019726571.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A3Q2XIP4
    Conserved Domains (3) summary
    cd06378
    Location:111 → 472
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:484 → 884
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:921 → 1699
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus

  2. XM_019871011.1 → XP_019726570.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A3Q2XIP4
    Related
    ENSHCOP00000004313.1, ENSHCOT00000007251.1
    Conserved Domains (3) summary
    cd06378
    Location:111 → 472
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:484 → 884
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:921 → 1699
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
Nucleotide Protein
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