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armc8 armadillo repeat containing 8 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109514522, updated on 14-Mar-2024

Summary

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Gene symbol
armc8
Gene description
armadillo repeat containing 8
See related
Ensembl:ENSHCOG00000004160
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805145.1 (288746..304036)

NW_017805145.1Genomic Context describing neighboring genes Neighboring gene RAB5B, member RAS oncogene family Neighboring gene debranching RNA lariats 1 Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 3 Neighboring gene isocitrate dehydrogenase (NADP(+)) 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805145.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
armadillo repeat-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805145.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    288746..304036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019867698.1 → XP_019723257.1  armadillo repeat-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XEV6
    Conserved Domains (4) summary
    COG5369
    Location:403 → 668
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:385 → 413
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:461 → 497
    ARM; armadillo repeat [structural motif]
    cl25709
    Location:28 → 118
    Arm_3; Atypical Arm repeat

  2. XM_019867700.1 → XP_019723259.1  armadillo repeat-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2XEV6, A0A3Q2XGP2
    Related
    ENSHCOP00000002887.1, ENSHCOT00000009672.1
    Conserved Domains (3) summary
    COG5369
    Location:361 → 626
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:343 → 371
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:419 → 455
    ARM; armadillo repeat [structural motif]

  3. XM_019867699.1 → XP_019723258.1  armadillo repeat-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2XEV6
    Conserved Domains (4) summary
    COG5369
    Location:390 → 655
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:372 → 400
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:448 → 484
    ARM; armadillo repeat [structural motif]
    cl25709
    Location:1 → 112
    Arm_3; Atypical Arm repeat
Nucleotide Protein
Heading Accession and Version

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