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micall2a mical-like 2a [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109513780, updated on 14-Mar-2024

Summary

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Gene symbol
micall2a
Gene description
mical-like 2a
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
micall2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805134.1 (784441..813293)

NW_017805134.1Genomic Context describing neighboring genes Neighboring gene v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K Neighboring gene integrator complex subunit 1 Neighboring gene paired mesoderm homeobox protein 2-like Neighboring gene uncharacterized LOC109513702 Neighboring gene UNC homeobox Neighboring gene zinc finger, AN1-type domain 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805134.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MICAL-like protein 2
Names
MICAL like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805134.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    784441..813293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019866437.1 → XP_019721996.1  MICAL-like protein 2 isoform X5

    Conserved Domains (3) summary
    cl02475
    Location:179 → 232
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:1 → 108
    CH; Calponin homology (CH) domain
    cl26464
    Location:335 → 510
    Atrophin-1; Atrophin-1 family

  2. XM_019866433.1 → XP_019721992.1  MICAL-like protein 2 isoform X1

    Conserved Domains (4) summary
    cl02475
    Location:179 → 232
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:1 → 108
    CH; Calponin homology (CH) domain
    pfam12130
    Location:522 → 658
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:335 → 514
    Atrophin-1; Atrophin-1 family

  3. XM_019866438.1 → XP_019721997.1  MICAL-like protein 2 isoform X6

    Conserved Domains (3) summary
    cl02475
    Location:179 → 232
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:1 → 108
    CH; Calponin homology (CH) domain
    cl26464
    Location:335 → 510
    Atrophin-1; Atrophin-1 family

  4. XM_019866435.1 → XP_019721994.1  MICAL-like protein 2 isoform X3

    Conserved Domains (4) summary
    cl02475
    Location:179 → 232
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:1 → 108
    CH; Calponin homology (CH) domain
    pfam12130
    Location:516 → 652
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:233 → 471
    Atrophin-1; Atrophin-1 family

  5. XM_019866434.1 → XP_019721993.1  MICAL-like protein 2 isoform X2

    Conserved Domains (4) summary
    cl02475
    Location:179 → 232
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:1 → 108
    CH; Calponin homology (CH) domain
    pfam12130
    Location:522 → 658
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:335 → 514
    Atrophin-1; Atrophin-1 family

  6. XM_019866436.1 → XP_019721995.1  MICAL-like protein 2 isoform X4

    Conserved Domains (4) summary
    cl02475
    Location:147 → 200
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam00307
    Location:29 → 76
    CH; Calponin homology (CH) domain
    pfam12130
    Location:490 → 626
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:303 → 482
    Atrophin-1; Atrophin-1 family

RNA

  1. XR_002167860.1 RNA Sequence

  2. XR_002167861.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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