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VPS9D1 VPS9 domain containing 1 [ Rhinolophus sinicus (Chinese rufous horseshoe bat) ]

Gene ID: 109451909, updated on 30-Mar-2024

Summary

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Gene symbol
VPS9D1
Gene description
VPS9 domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus sinicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM188883v1 (GCF_001888835.1) Unplaced Scaffold NW_017739080.1 (201709..213106)

NW_017739080.1Genomic Context describing neighboring genes Neighboring gene FA complementation group A Neighboring gene zinc finger protein 276 Neighboring gene spermatogenesis associated 2 like Neighboring gene cyclin dependent kinase 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017739080.1 Unplaced Scaffold Reference ASM188883v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
VPS9 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinolophus sinicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM188883v1

Genomic

  1. NW_017739080.1 Reference ASM188883v1

    Range
    201709..213106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019740496.1 → XP_019596055.1  VPS9 domain-containing protein 1 isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:304 → 431
    PHA03247; large tegument protein UL36; Provisional
    pfam02204
    Location:542 → 656
    VPS9; Vacuolar sorting protein 9 (VPS9) domain

  2. XM_019740495.1 → XP_019596054.1  VPS9 domain-containing protein 1 isoform X3

    Conserved Domains (3) summary
    PHA03247
    Location:299 → 426
    PHA03247; large tegument protein UL36; Provisional
    COG0419
    Location:129 → 204
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam02204
    Location:553 → 667
    VPS9; Vacuolar sorting protein 9 (VPS9) domain

  3. XM_019740494.1 → XP_019596053.1  VPS9 domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:303 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam02204
    Location:557 → 671
    VPS9; Vacuolar sorting protein 9 (VPS9) domain

  4. XM_019740497.1 → XP_019596056.1  VPS9 domain-containing protein 1 isoform X5

    Conserved Domains (2) summary
    PHA03247
    Location:303 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam02204
    Location:531 → 645
    VPS9; Vacuolar sorting protein 9 (VPS9) domain

  5. XM_019740493.1 → XP_019596052.1  VPS9 domain-containing protein 1 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:304 → 431
    PHA03247; large tegument protein UL36; Provisional
    pfam02204
    Location:558 → 672
    VPS9; Vacuolar sorting protein 9 (VPS9) domain

  6. XM_019740499.1 → XP_019596058.1  VPS9 domain-containing protein 1 isoform X6

    Conserved Domains (2) summary
    PHA03247
    Location:241 → 368
    PHA03247; large tegument protein UL36; Provisional
    pfam02204
    Location:495 → 609
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
Nucleotide Protein
Heading Accession and Version

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