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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ASM188883v1
Genomic
-
NW_017738988.1 Reference ASM188883v1
- Range
-
2247065..2435676
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_019730239.1 → XP_019585798.1 intersectin-1 isoform X2
- Conserved Domains (11) summary
-
- cd08375
Location:1577 → 1711
- C2_Intersectin; C2 domain present in Intersectin
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11987
Location:744 → 798
- SH3_Intersectin1_1; First Src homology 3 domain (or SH3A) of Intersectin-1
- cd11989
Location:912 → 963
- SH3_Intersectin1_2; Second Src homology 3 domain (or SH3B) of Intersectin-1
- cd11991
Location:1001 → 1052
- SH3_Intersectin1_3; Third Src homology 3 domain (or SH3C) of Intersectin-1
- cd11993
Location:1069 → 1133
- SH3_Intersectin1_4; Fourth Src homology 3 domain (or SH3D) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00160
Location:1233 → 1416
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13264
Location:1443 → 1574
- PH_ITSN; Intersectin Pleckstrin homology (PH) domain
- cl17036
Location:1153 → 1206
- SH3; Src Homology 3 domain superfamily
-
XM_019730246.1 → XP_019585805.1 intersectin-1 isoform X8
- Conserved Domains (5) summary
-
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11839
Location:1007 → 1064
- SH3_Intersectin_4; Fourth Src homology 3 domain (or SH3D) of Intersectin
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl17036
Location:744 → 803
- SH3; Src Homology 3 domain superfamily
-
XM_019730245.1 → XP_019585804.1 intersectin-1 isoform X7
- Conserved Domains (6) summary
-
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11987
Location:744 → 798
- SH3_Intersectin1_1; First Src homology 3 domain (or SH3A) of Intersectin-1
- cd11991
Location:1001 → 1052
- SH3_Intersectin1_3; Third Src homology 3 domain (or SH3C) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl17036
Location:1069 → 1133
- SH3; Src Homology 3 domain superfamily
-
XM_019730247.1 → XP_019585806.1 intersectin-1 isoform X9
- Conserved Domains (6) summary
-
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11839
Location:1002 → 1059
- SH3_Intersectin_4; Fourth Src homology 3 domain (or SH3D) of Intersectin
- cd11987
Location:744 → 798
- SH3_Intersectin1_1; First Src homology 3 domain (or SH3A) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl17036
Location:1082 → 1135
- SH3; Src Homology 3 domain superfamily
-
XM_019730238.1 → XP_019585797.1 intersectin-1 isoform X1
- Conserved Domains (10) summary
-
- cd08375
Location:1582 → 1716
- C2_Intersectin; C2 domain present in Intersectin
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11989
Location:917 → 968
- SH3_Intersectin1_2; Second Src homology 3 domain (or SH3B) of Intersectin-1
- cd11991
Location:1006 → 1057
- SH3_Intersectin1_3; Third Src homology 3 domain (or SH3C) of Intersectin-1
- cd11993
Location:1074 → 1138
- SH3_Intersectin1_4; Fourth Src homology 3 domain (or SH3D) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00160
Location:1238 → 1421
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13264
Location:1448 → 1579
- PH_ITSN; Intersectin Pleckstrin homology (PH) domain
- cl17036
Location:744 → 803
- SH3; Src Homology 3 domain superfamily
-
XM_019730240.1 → XP_019585799.1 intersectin-1 isoform X3
- Conserved Domains (8) summary
-
- cd08375
Location:1511 → 1645
- C2_Intersectin; C2 domain present in Intersectin
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11989
Location:917 → 968
- SH3_Intersectin1_2; Second Src homology 3 domain (or SH3B) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00160
Location:1167 → 1350
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13264
Location:1377 → 1508
- PH_ITSN; Intersectin Pleckstrin homology (PH) domain
- cl17036
Location:1006 → 1067
- SH3; Src Homology 3 domain superfamily
-
XM_019730241.1 → XP_019585800.1 intersectin-1 isoform X4
- Conserved Domains (10) summary
-
- cd08375
Location:1506 → 1640
- C2_Intersectin; C2 domain present in Intersectin
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11987
Location:744 → 798
- SH3_Intersectin1_1; First Src homology 3 domain (or SH3A) of Intersectin-1
- cd11989
Location:912 → 963
- SH3_Intersectin1_2; Second Src homology 3 domain (or SH3B) of Intersectin-1
- cd11995
Location:1082 → 1135
- SH3_Intersectin1_5; Fifth Src homology 3 domain (or SH3E) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00160
Location:1162 → 1345
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13264
Location:1372 → 1503
- PH_ITSN; Intersectin Pleckstrin homology (PH) domain
- cl17036
Location:1001 → 1062
- SH3; Src Homology 3 domain superfamily
-
XM_019730242.1 → XP_019585801.1 intersectin-1 isoform X5
- Conserved Domains (5) summary
-
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11991
Location:1006 → 1057
- SH3_Intersectin1_3; Third Src homology 3 domain (or SH3C) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl17036
Location:1074 → 1138
- SH3; Src Homology 3 domain superfamily
-
XM_019730244.1 → XP_019585803.1 intersectin-1 isoform X6
- Conserved Domains (5) summary
-
- smart00027
Location:214 → 309
- EH; Eps15 homology domain
- cd11991
Location:1006 → 1057
- SH3_Intersectin1_3; Third Src homology 3 domain (or SH3C) of Intersectin-1
- PLN02983
Location:131 → 202
- PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
- COG1196
Location:335 → 674
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl17036
Location:1074 → 1138
- SH3; Src Homology 3 domain superfamily