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XRN1 5'-3' exoribonuclease 1 [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109390466, updated on 30-Mar-2024

Summary

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Gene symbol
XRN1
Gene description
5'-3' exoribonuclease 1
See related
EnsemblRapid:ENSHARG00000022548
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731620.1 (371289..547147, complement)

NW_017731620.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 7A Neighboring gene glycerol kinase 5 Neighboring gene ATR serine/threonine kinase Neighboring gene transfer RNA isoleucine (anticodon UAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731620.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exoribonuclease 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731620.1 Reference ASM189008v1 Primary Assembly

    Range
    371289..547147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019656937.1 → XP_019512482.1  5'-3' exoribonuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7SGK8

  2. XM_019656939.1 → XP_019512484.1  5'-3' exoribonuclease 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B7SIN9

  3. XM_019656938.1 → XP_019512483.1  5'-3' exoribonuclease 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B7SIU5
    Related
    ENSHARP00000037337.1, ENSHART00000041895.1

  4. XM_019656940.1 → XP_019512485.1  5'-3' exoribonuclease 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B7SKJ2
    Related
    ENSHARP00000037336.1, ENSHART00000041894.1

  5. XM_019656936.1 → XP_019512481.1  5'-3' exoribonuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7SGN0
Nucleotide Protein
Heading Accession and Version

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