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Cdcp1 CUB domain containing protein 1 [ Mus musculus (house mouse) ]

Gene ID: 109332, updated on 23-May-2016
Official Symbol
Cdcp1provided by MGI
Official Full Name
CUB domain containing protein 1provided by MGI
Primary source
MGI:MGI:2442010
See related
Ensembl:ENSMUSG00000035498 Vega:OTTMUSG00000027392
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AA409659; 9030022E12Rik; E030027H19Rik
Orthologs
Location:
9; 9 F4
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 9 NC_000075.6 (123170805..123216124, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (123081403..123125156, complement)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene exosome component 7 Neighboring gene C-type lectin domain family 3, member b Neighboring gene transmembrane protein 158 Neighboring gene predicted gene, 39466

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
CUB domain-containing protein 1
Names
membrane glycoprotein gp140
transmembrane and associated with src kinases

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133974.3NP_598735.2  CUB domain-containing protein 1 precursor

    See identical proteins and their annotated locations for NP_598735.2

    Status: PROVISIONAL

    Source sequence(s)
    AC134248
    Consensus CDS
    CCDS23657.1
    UniProtKB/Swiss-Prot
    Q5U462
    Related
    ENSMUSP00000042057, OTTMUSP00000034133, ENSMUST00000039229, OTTMUST00000067747
    Conserved Domains (1) summary
    cl00049
    Location:225297
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p3 C57BL/6J

    Range
    123170805..123216124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006511921.2XP_006511984.1  

    Conserved Domains (1) summary
    cl00049
    Location:224296
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
  2. XM_006511922.2XP_006511985.1  

    Conserved Domains (1) summary
    cl00049
    Location:166238
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.

Alternate Mm_Celera

Genomic

  1. AC_000031.1 Alternate Mm_Celera

    Range
    123623251..123665086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)