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CTNNA2 catenin alpha 2 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109322111, updated on 14-Mar-2024

Summary

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Gene symbol
CTNNA2
Gene description
catenin alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728948.1 (5802633..6673372)

NW_017728948.1Genomic Context describing neighboring genes Neighboring gene natural killer cells antigen CD94-like Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene uncharacterized LOC109322113 Neighboring gene leucine rich repeat transmembrane neuronal 1 Neighboring gene uncharacterized LOC109321971 Neighboring gene transfer RNA threonine (anticodon UGU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728948.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728948.1 Reference CroPor_comp1 Primary Assembly

    Range
    5802633..6673372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019552979.1 → XP_019408524.1  catenin alpha-2 isoform X1

  2. XM_019552980.1 → XP_019408525.1  catenin alpha-2 isoform X2

    Conserved Domains (1) summary
    pfam01044
    Location:81 → 866
    Vinculin; Vinculin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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