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VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109321424, updated on 14-Mar-2024

Summary

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Gene symbol
VIPAS39
Gene description
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
See related
Ensembl:ENSCPRG00005005434
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728947.1 (77511512..77529149, complement)

NW_017728947.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 15 Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene activator of HSP90 ATPase activity 1 Neighboring gene isthmin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728947.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-defective protein 39 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728947.1 Reference CroPor_comp1 Primary Assembly

    Range
    77511512..77529149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019552083.1 → XP_019407628.1  spermatogenesis-defective protein 39 homolog isoform X2

  2. XM_019552082.1 → XP_019407627.1  spermatogenesis-defective protein 39 homolog isoform X1

    UniProtKB/TrEMBL
    A0A7M4EDZ3
    Related
    ENSCPRP00005007651.1, ENSCPRT00005008970.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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