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PCDH9 protocadherin 9 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109302630, updated on 14-Mar-2024

Summary

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Gene symbol
PCDH9
Gene description
protocadherin 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729032.1 (87767548..87774409, complement)

NW_017729032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109302487 Neighboring gene uncharacterized LOC109302631 Neighboring gene GTPase IMAP family member 5-like Neighboring gene uncharacterized LOC109303474

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017729032.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729032.1 Reference GavGan_comp1 Primary Assembly

    Range
    87767548..87774409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019524262.1 → XP_019379807.1  protocadherin-9 isoform X2

  2. XM_019524261.1 → XP_019379806.1  protocadherin-9 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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