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OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109290525, updated on 14-Mar-2024

Summary

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Gene symbol
OGFOD2
Gene description
2-oxoglutarate and iron dependent oxygenase domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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See OGFOD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729001.1 (28376589..28389672, complement)

NW_017729001.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol transfer protein membrane associated 2 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 4 Neighboring gene ATP binding cassette subfamily B member 9 Neighboring gene VPS37B subunit of ESCRT-I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017729001.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729001.1 Reference GavGan_comp1 Primary Assembly

    Range
    28376589..28389672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019507161.1 → XP_019362706.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1

  2. XM_019507162.1 → XP_019362707.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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