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NLGN1 neuroligin 1 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109287993, updated on 14-Mar-2024

Summary

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Gene symbol
NLGN1
Gene description
neuroligin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017728995.1 (19970809..20706432)

NW_017728995.1Genomic Context describing neighboring genes Neighboring gene epithelial cell transforming 2 Neighboring gene spermatogenesis associated 16 Neighboring gene uncharacterized LOC109287996 Neighboring gene uncharacterized LOC109287995 Neighboring gene uncharacterized LOC109287994

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728995.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in presynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic specialization membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuroligin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017728995.1 Reference GavGan_comp1 Primary Assembly

    Range
    19970809..20706432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019503315.1 → XP_019358860.1  neuroligin-1 isoform X1

  2. XM_019503316.1 → XP_019358861.1  neuroligin-1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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