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PPRC1 PPARG related coactivator 1 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109287175, updated on 14-Mar-2024

Summary

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Gene symbol
PPRC1
Gene description
PPARG related coactivator 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017728994.1 (45828490..45841674, complement)

NW_017728994.1Genomic Context describing neighboring genes Neighboring gene ligand dependent nuclear receptor corepressor Neighboring gene uncharacterized LOC109287539 Neighboring gene LIM domain binding 1 Neighboring gene prominin-1-A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728994.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Names
peroxisome proliferator-activated receptor gamma, coactivator-related 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017728994.1 Reference GavGan_comp1 Primary Assembly

    Range
    45828490..45841674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019502139.1 → XP_019357684.1  LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1

Nucleotide Protein
Heading Accession and Version

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