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HPS6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 [ Panthera pardus (leopard) ]

Gene ID: 109272809, updated on 14-Mar-2024

Summary

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Gene symbol
HPS6
Gene description
HPS6 biogenesis of lysosomal organelles complex 2 subunit 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526788.1 (59810496..59813232)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619878.1 (5315335..5318075)

NW_026526788.1Genomic Context describing neighboring genes Neighboring gene armadillo like helical domain containing 3 Neighboring gene cytochrome c oxidase assembly protein COX20, mitochondrial-like Neighboring gene 10 kDa heat shock protein, mitochondrial-like Neighboring gene LIM domain binding 1 Neighboring gene PPARG related coactivator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lysosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in organelle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BLOC-2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BLOC-2 complex member HPS6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526788.1 Reference ASM2436296v1 Primary Assembly

    Range
    59810496..59813232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019459229.2 → XP_019314774.2  BLOC-2 complex member HPS6

    UniProtKB/TrEMBL
    A0A9V1G494
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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