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PRDM4 PR/SET domain 4 [ Panthera pardus (leopard) ]

Gene ID: 109265470, updated on 14-Mar-2024

Summary

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Gene symbol
PRDM4
Gene description
PR/SET domain 4
See related
Ensembl:ENSPPRG00000004144
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526991.1 (14795430..14821575)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619858.1 (17896570..17924541, complement)

NW_026526991.1Genomic Context describing neighboring genes Neighboring gene RNA 2',3'-cyclic phosphate and 5'-OH ligase Neighboring gene achaete-scute family bHLH transcription factor 4 Neighboring gene PWP1 homolog, endonuclein Neighboring gene ankyrin repeat and BTB domain containing 3 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone methyltransferase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain zinc finger protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526991.1 Reference ASM2436296v1 Primary Assembly

    Range
    14795430..14821575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019446698.2 → XP_019302243.2  PR domain zinc finger protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A9V1FGB9

  2. XM_053894955.1 → XP_053750930.1  PR domain zinc finger protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A9W2UWV1

  3. XM_019446701.2 → XP_019302246.2  PR domain zinc finger protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A9V1FGI6

  4. XM_053894956.1 → XP_053750931.1  PR domain zinc finger protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A9W2UXC3

  5. XM_019446697.2 → XP_019302242.2  PR domain zinc finger protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A9V1FGB9
Nucleotide Protein
Heading Accession and Version

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