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TRNAU1AP tRNA selenocysteine 1 associated protein 1 [ Panthera pardus (leopard) ]

Gene ID: 109256792, updated on 14-Mar-2024

Summary

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Gene symbol
TRNAU1AP
Gene description
tRNA selenocysteine 1 associated protein 1
See related
Ensembl:ENSPPRG00000004416
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526666.1 (85242495..85268735, complement)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619990.1 (855076..881387, complement)

NW_026526666.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109256793 Neighboring gene small nucleolar RNA SNORA61 Neighboring gene small nucleolar RNA SNORD99 Neighboring gene small nucleolar RNA U13 Neighboring gene regulator of chromosome condensation 1 Neighboring gene small nucleolar RNA SNORA73 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA selenocysteine 1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526666.1 Reference ASM2436296v1 Primary Assembly

    Range
    85242495..85268735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019432462.2 → XP_019288007.1  tRNA selenocysteine 1-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A9V1ESV7
    Conserved Domains (3) summary
    pfam17654
    Location:154 → 256
    Trnau1ap; Selenocysteine tRNA 1 associated proteins
    cd12612
    Location:44 → 125
    RRM2_SECp43; RNA recognition motif 2 (RRM2) found in tRNA selenocysteine-associated protein 1 (SECp43)
    cl17169
    Location:4 → 103
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_019432458.2 → XP_019288003.1  tRNA selenocysteine 1-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ESU3
    Conserved Domains (3) summary
    pfam17654
    Location:205 → 307
    Trnau1ap; Selenocysteine tRNA 1 associated proteins
    cd12610
    Location:4 → 87
    RRM1_SECp43; RNA recognition motif 1 (RRM1) found in tRNA selenocysteine-associated protein 1 (SECp43)
    cd12612
    Location:95 → 176
    RRM2_SECp43; RNA recognition motif 2 (RRM2) found in tRNA selenocysteine-associated protein 1 (SECp43)

  3. XM_019432459.2 → XP_019288004.1  tRNA selenocysteine 1-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9V1EST9
    Conserved Domains (3) summary
    pfam17654
    Location:192 → 294
    Trnau1ap; Selenocysteine tRNA 1 associated proteins
    cd12610
    Location:1 → 74
    RRM1_SECp43; RNA recognition motif 1 (RRM1) found in tRNA selenocysteine-associated protein 1 (SECp43)
    cd12612
    Location:82 → 163
    RRM2_SECp43; RNA recognition motif 2 (RRM2) found in tRNA selenocysteine-associated protein 1 (SECp43)

  4. XM_019432461.2 → XP_019288006.1  tRNA selenocysteine 1-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A9V1ESU8
    Related
    ENSPPRP00000010181.1
    Conserved Domains (3) summary
    pfam17654
    Location:205 → 284
    Trnau1ap; Selenocysteine tRNA 1 associated proteins
    cd12610
    Location:4 → 87
    RRM1_SECp43; RNA recognition motif 1 (RRM1) found in tRNA selenocysteine-associated protein 1 (SECp43)
    cd12612
    Location:95 → 176
    RRM2_SECp43; RNA recognition motif 2 (RRM2) found in tRNA selenocysteine-associated protein 1 (SECp43)
Nucleotide Protein
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