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PROX1 prospero homeobox 1 [ Panthera pardus (leopard) ]

Gene ID: 109254477, updated on 14-Mar-2024

Summary

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Gene symbol
PROX1
Gene description
prospero homeobox 1
See related
Ensembl:ENSPPRG00000009669
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526777.1 (39472309..39524445)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619849.1 (29680719..29742439, complement)

NW_026526777.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109254525 Neighboring gene collagen alpha-1(III) chain-like Neighboring gene uncharacterized LOC128778901 Neighboring gene uncharacterized LOC109254467

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526777.1 Reference ASM2436296v1 Primary Assembly

    Range
    39472309..39524445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019428421.2 → XP_019283966.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  2. XM_019428472.2 → XP_019284017.1  prospero homeobox protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9V1EL84
    Related
    ENSPPRP00000017829.1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 730
    HPD; Homeo-prospero domain

  3. XM_019428427.2 → XP_019283972.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  4. XM_019428437.2 → XP_019283982.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  5. XM_019428456.2 → XP_019284001.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  6. XM_019428447.2 → XP_019283992.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  7. XM_019428461.2 → XP_019284006.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9V1ELG1
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain
Nucleotide Protein
Heading Accession and Version

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