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ATG2A autophagy related 2A [ Panthera pardus (leopard) ]

Gene ID: 109246688, updated on 14-Mar-2024

Summary

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Gene symbol
ATG2A
Gene description
autophagy related 2A
See related
Ensembl:ENSPPRG00000005397
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526677.1 (7615466..7635302)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619909.1 (6673563..6695432, complement)

NW_026526677.1Genomic Context describing neighboring genes Neighboring gene membrane anchored junction protein Neighboring gene protein phosphatase 2 regulatory subunit B'beta Neighboring gene glycoprotein hormone subunit alpha 2 Neighboring gene uncharacterized LOC109246689 Neighboring gene EH domain containing 1 Neighboring gene uncharacterized LOC128776138

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 2 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526677.1 Reference ASM2436296v1 Primary Assembly

    Range
    7615466..7635302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019414896.2 → XP_019270441.2  autophagy-related protein 2 homolog A isoform X1

    UniProtKB/TrEMBL
    A0A9V1DYX5

  2. XM_053899482.1 → XP_053755457.1  autophagy-related protein 2 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A9W2V9Q5

  3. XM_019414898.2 → XP_019270443.2  autophagy-related protein 2 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A9V1DZ71
Nucleotide Protein
Heading Accession and Version

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