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ddx55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [ Cyprinus carpio (common carp) ]

Gene ID: 109110491, updated on 14-Mar-2024

Summary

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Gene symbol
ddx55
Gene description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
See related
Ensembl:ENSCCRG00000019303
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: A10
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A10 NC_056581.1 (18376372..18384162)
100 previous assembly common carp genome (GCF_000951615.1) 4 NC_031700.1 (4093571..4100664, complement)

Chromosome A10 - NC_056581.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 11a Neighboring gene transmembrane emp24 domain-containing protein 2-like Neighboring gene N-alpha-acetyltransferase 25, NatB auxiliary subunit-like Neighboring gene BRCA1-associated protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX55
Names
DEAD-box helicase 55

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056581.1 Reference ASM1834038v1 Primary Assembly

    Range
    18376372..18384162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042765604.1 → XP_042621538.1  ATP-dependent RNA helicase DDX55

    UniProtKB/TrEMBL
    A0A8C1T4P4, A0A9Q9YJU1
    Conserved Domains (2) summary
    COG0513
    Location:8 → 501
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17960
    Location:20 → 224
    DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55
Nucleotide Protein
Heading Accession and Version

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