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zbtb8os zinc finger and BTB domain containing 8 opposite strand [ Cyprinus carpio (common carp) ]

Gene ID: 109105836, updated on 14-Mar-2024

Summary

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Gene symbol
zbtb8os
Gene description
zinc finger and BTB domain containing 8 opposite strand
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: A13
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A13 NC_056584.1 (24611603..24626969)
100 previous assembly common carp genome (GCF_000951615.1) 32 NC_031728.1 (9068058..9081521, complement)

Chromosome A13 - NC_056584.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein 9-like Neighboring gene lactoylglutathione lyase-like Neighboring gene oocyte zinc finger protein XlCOF6.1-like Neighboring gene CD276 antigen Neighboring gene KH domain-containing, RNA-binding, signal transduction-associated protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein archease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056584.1 Reference ASM1834038v1 Primary Assembly

    Range
    24611603..24626969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042769454.1 → XP_042625388.1  protein archease isoform X2

    UniProtKB/TrEMBL
    A0A8C1JPV3, A0A9J7X4P9, A0A9R0B7Z7
    Conserved Domains (1) summary
    cl00606
    Location:23 → 143
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_042769453.1 → XP_042625387.1  protein archease isoform X1

    UniProtKB/TrEMBL
    A0A8C1JPV3, A0A9J8B1K8, A0A9R0B7W7
    Conserved Domains (1) summary
    COG1371
    Location:24 → 162
    Archease; Archease protein family (MTH1598/TM1083)[General function prediction only]
Nucleotide Protein
Heading Accession and Version

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