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LOC109097657 beta-galactosidase-1-like protein 2 [ Cyprinus carpio (common carp) ]

Gene ID: 109097657, updated on 14-Mar-2024

Summary

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Gene symbol
LOC109097657
Gene description
beta-galactosidase-1-like protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: B10
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B10 NC_056606.1 (18428839..18442761, complement)
100 previous assembly common carp genome (GCF_000951615.1) 20 NC_031716.1 (11568921..11583110, complement)

Chromosome B10 - NC_056606.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 37 member 4b Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene STT3 oligosaccharyltransferase complex catalytic subunit A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: beta-galactosidase-1-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056606.1 Reference ASM1834038v1 Primary Assembly

    Range
    18428839..18442761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042733022.1 → XP_042588956.1  LOW QUALITY PROTEIN: beta-galactosidase-1-like protein 2

    UniProtKB/TrEMBL
    A0A9J8BLX8, A0A9Q9WTY5
    Conserved Domains (1) summary
    PLN03059
    Location:52 → 360
    PLN03059; beta-galactosidase; Provisional
Nucleotide Protein
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