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pop5 POP5 homolog, ribonuclease P/MRP subunit [ Cyprinus carpio (common carp) ]

Gene ID: 109095351, updated on 14-Mar-2024

Summary

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Gene symbol
pop5
Gene description
POP5 homolog, ribonuclease P/MRP subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See pop5 in Genome Data Viewer
Location:
chromosome: B8
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B8 NC_056604.1 (19692762..19694859, complement)
100 previous assembly common carp genome (GCF_000951615.1) 16 NC_031712.1 (11717015..11718237)

Chromosome B8 - NC_056604.1Genomic Context describing neighboring genes Neighboring gene putative aminopeptidase W07G4.4 Neighboring gene RING finger protein 10-like Neighboring gene olfactomedin-like 2A Neighboring gene alpha-2-macroglobulin-like protein 1 Neighboring gene uncharacterized LOC122138257

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribonuclease P RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease P/MRP protein subunit POP5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056604.1 Reference ASM1834038v1 Primary Assembly

    Range
    19692762..19694859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042730032.1 → XP_042585966.1  ribonuclease P/MRP protein subunit POP5

    UniProtKB/TrEMBL
    A0A8C1LVG5, A0A9J7XD90
    Conserved Domains (1) summary
    cl00605
    Location:4 → 124
    RNase_P_Rpp14; Rpp14/Pop5 family
Nucleotide Protein
Heading Accession and Version

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