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prdx5 peroxiredoxin 5 [ Cyprinus carpio (common carp) ]

Gene ID: 109045656, updated on 14-Mar-2024

Summary

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Gene symbol
prdx5
Gene description
peroxiredoxin 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See prdx5 in Genome Data Viewer
Location:
chromosome: A21
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A21 NC_056592.1 (13533065..13536946)
100 previous assembly common carp genome (GCF_000951615.1) 41 NC_031737.1 (12869060..12871750)

Chromosome A21 - NC_056592.1Genomic Context describing neighboring genes Neighboring gene high choriolytic enzyme 1-like Neighboring gene estrogen-related receptor alpha Neighboring gene nuclear RNA export factor 1b Neighboring gene BSCL2 lipid droplet biogenesis associated, seipin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioredoxin peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: peroxiredoxin-5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056592.1 Reference ASM1834038v1 Primary Assembly

    Range
    13533065..13536946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042710935.1 → XP_042566869.1  LOW QUALITY PROTEIN: peroxiredoxin-5, mitochondrial

    UniProtKB/TrEMBL
    A0A8C1LW35, A0A9J8BNJ3, A0A9Q9VKT2
    Conserved Domains (1) summary
    cd03013
    Location:32 → 184
    PRX5_like; Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 ...
Nucleotide Protein
Heading Accession and Version

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