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VPS13C vacuolar protein sorting 13 homolog C [ Serinus canaria (Common canary) ]

Gene ID: 108961165, updated on 14-Mar-2024

Summary

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Gene symbol
VPS13C
Gene description
vacuolar protein sorting 13 homolog C
See related
EnsemblRapid:ENSSCAG00000022911
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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See VPS13C in Genome Data Viewer
Location:
chromosome: 10
Exon count:
84
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 10 NC_066324.1 (16435838..16510757, complement)

Chromosome 10 - NC_066324.1Genomic Context describing neighboring genes Neighboring gene interactor of little elongation complex ELL subunit 2 Neighboring gene RAR related orphan receptor A Neighboring gene C2 calcium-dependent domain-containing protein 4C-like Neighboring gene talin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066324.1 Chromosome 10 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein retention in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intermembrane lipid transfer protein VPS13C
Names
vacuolar protein sorting-associated protein 13C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066324.1 Reference serCan2020 Primary Assembly

    Range
    16435838..16510757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050978370.1 → XP_050834327.1  intermembrane lipid transfer protein VPS13C isoform X1

    Related
    ENSSCAP00000024578.1, ENSSCAT00000035515.1

  2. XM_050978371.1 → XP_050834328.1  intermembrane lipid transfer protein VPS13C isoform X2

    Related
    ENSSCAP00000028856.1, ENSSCAT00000029963.1
Nucleotide Protein
Heading Accession and Version

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