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matn2 matrilin 2 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108940548, updated on 22-Oct-2023

Summary

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Gene symbol
matn2
Gene description
matrilin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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Genomic context

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See matn2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 18 NC_041823.1 (5322009..5337379)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372153.1 (6005255..6021043, complement)

Chromosome 18 - NC_041823.1Genomic Context describing neighboring genes Neighboring gene metadherin Neighboring gene lysosomal protein transmembrane 4 beta Neighboring gene translation initiation factor IF-2-like Neighboring gene ribosomal protein L30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041823.1 Reference fSclFor1.1 Primary Assembly

    Range
    5322009..5337379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029245967.1 → XP_029101800.1  matrilin-2

    Conserved Domains (3) summary
    pfam07645
    Location:349 → 387
    EGF_CA; Calcium-binding EGF domain
    pfam14670
    Location:229 → 264
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:2 → 222
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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