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zbtb8a zinc finger and BTB domain containing 8A [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108931287, updated on 14-Mar-2024

Summary

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Gene symbol
zbtb8a
Gene description
zinc finger and BTB domain containing 8A
See related
Ensembl:ENSSFOG00015023510
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 15 NC_041820.1 (205270..210685, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371678.1 (201901..203591, complement)

Chromosome 15 - NC_041820.1Genomic Context describing neighboring genes Neighboring gene UDP-galactose-4-epimerase Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene poly(A) binding protein, cytoplasmic 4 (inducible form) Neighboring gene gap junction protein beta 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 8A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041820.1 Reference fSclFor1.1 Primary Assembly

    Range
    205270..210685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029258430.1 → XP_029114263.1  zinc finger and BTB domain-containing protein 8A isoform X2

    UniProtKB/TrEMBL
    A0A8C9SPL6
    Related
    ENSSFOP00015036948.2, ENSSFOT00015037350.2
    Conserved Domains (4) summary
    COG5048
    Location:383 → 446
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:395 → 415
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:407 → 432
    zf-H2C2_2; Zinc-finger double domain
    cl38908
    Location:125 → 240
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

  2. XM_029258429.1 → XP_029114262.1  zinc finger and BTB domain-containing protein 8A isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:409 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:421 → 441
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:433 → 458
    zf-H2C2_2; Zinc-finger double domain
    cl38908
    Location:151 → 266
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

  3. XM_029258431.1 → XP_029114264.1  zinc finger and BTB domain-containing protein 8A isoform X3

    UniProtKB/TrEMBL
    A0A0P7XVR2
    Conserved Domains (4) summary
    COG5048
    Location:260 → 323
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:272 → 292
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:284 → 309
    zf-H2C2_2; Zinc-finger double domain
    cl38908
    Location:2 → 117
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
Nucleotide Protein
Heading Accession and Version

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